Gene: AT5G24110
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G24110
- Transcript Identifier AT5G24110.1
- Gene Type Coding gene
- Location Chr5 : 8153416-8154633 : negative
Gene Family Information
- ID HOM05D000405
- #Genes/#Species 1246/95
- Phylogenetic origin
- ID ORTHO05D000974
- #Genes/#Species 534/94
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT5G24110.1
- symbol WRKY30
- Alias ATWRKY30,ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 30
- uniprot Q9FL62
Descriptions
- Description WRKY DNA-binding protein 30
- Computational description WRKY DNA-binding protein 30 (WRKY30); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: stem, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G23810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | Solyc10g009550.3 |
| GO:0006355 | IEA | Gene Ontology | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0042542 | IEP | Gene Ontology | response to hydrogen peroxide | 1 |
| GO:0010193 | IEP | Gene Ontology | response to ozone | 1 |
| GO:0010150 | IEP | Gene Ontology | leaf senescence | 1 |
| GO:0009751 | IEP | Gene Ontology | response to salicylic acid | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003700 | IEA | GOA Database | DNA-binding transcription factor activity | |
| GO:0003700 | ISS, IBA | Gene Ontology | DNA-binding transcription factor activity | 2 |
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0043565 | IEA | GOA Database | sequence-specific DNA binding | |
| GO:0043565 | IEA | InterPro | sequence-specific DNA binding | |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0000976 | IDA IBA | Gene Ontology | transcription cis-regulatory region binding | 2 3 |
| GO:0005515 | IPI | Gene Ontology | protein binding | 1 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IDA ISM, IBA | Gene Ontology | nucleus | 2 4 |
| GO:0005737 | IDA | Gene Ontology | cytoplasm | 4 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.22.1 | RNA biosynthesis.transcriptional regulation.WRKY transcription factor activity.transcription factor (WRKY) |