Gene: AT5G19490

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G19490
  • Transcript Identifier AT5G19490.1
  • Gene Type Coding gene
  • Location Chr5 : 6576769-6578273 : negative

Gene Family Information

  • ID HOM05D002489
  • #Genes/#Species 273/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G19490.1
  • uniprot F4K162

Descriptions

  • Description Histone superfamily protein
  • Computational description Histone superfamily protein; FUNCTIONS IN: sequence-specific DNA binding, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit C11 (TAIR:AT3G12480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046982
IEA
Gene Ontologyprotein heterodimerization activity
GO:0046982
IEA
InterProprotein heterodimerization activity
GO:0005515
IPI
Gene Ontologyprotein binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003958 Transcription factor CBF/NF-Y/archaeal histone domain
IPR009072 Histone-fold
Mapman id Description
15.3.3.6.1.1 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TATA box-binding protein (TBP) regulation.NC2 regulator heterodimer.component alpha