Gene: AT5G18100

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G18100
  • Transcript Identifier AT5G18100.1
  • Gene Type Coding gene
  • Location Chr5 : 5987221-5988706 : positive

Gene Family Information

  • ID HOM05D001405
  • #Genes/#Species 446/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G18100.1
  • symbol CSD3
  • uniprot Q9FK60

Descriptions

  • Description copper/zinc superoxide dismutase 3
  • Computational description copper/zinc superoxide dismutase 3 (CSD3); FUNCTIONS IN: superoxide dismutase activity; INVOLVED IN: response to oxidative stress, oxygen and reactive oxygen species metabolic process, removal of superoxide radicals; LOCATED IN: peroxisome, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Superoxide dismutase, copper/zinc, binding site (InterPro:IPR018152), Superoxide dismutase, copper/zinc binding (InterPro:IPR001424); BEST Arabidopsis thaliana protein match is: copper/zinc superoxide dismutase 1 (TAIR:AT1G08830.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006801
IEA
GOA Databasesuperoxide metabolic process
GO:0006801
IEA
InterProsuperoxide metabolic process
GO:0019430
IBA
IC
Gene Ontologyremoval of superoxide radicals1 2
GO:0071493
IEP
Gene Ontologycellular response to UV-B1
GO:0071486
IEP
Gene Ontologycellular response to high light intensity1
GO:0071484
IEP
Gene Ontologycellular response to light intensity1
GO:0071457
IEP
Gene Ontologycellular response to ozone1
GO:0006979
IEP
TAS
Gene Ontologyresponse to oxidative stress1
GO:0071472
IEP
Gene Ontologycellular response to salt stress3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004784
IEA
GOA Databasesuperoxide dismutase activity
GO:0004784
ISS, IBA
Gene Ontologysuperoxide dismutase activity1 2
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0046872
IEA
InterPrometal ion binding
GO:0016209
IEA
GOA Databaseantioxidant activity
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0005507
IBA
Gene Ontologycopper ion binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005777
IDA
IEA
GOA Databaseperoxisome
GO:0005777
HDA
NAS
Gene Ontologyperoxisome1 4
GO:0005773
IDA
GOA Databasevacuole
GO:0009507
ISM
Gene Ontologychloroplast
GO:0000325
HDA
Gene Ontologyplant-type vacuole5

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001424 Superoxide dismutase, copper/zinc binding domain
IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily
IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone
Mapman id Description
10.2.1.3 Redox homeostasis.enzymatic reactive oxygen scavenging.superoxide dismutase activities.copper/zinc superoxide dismutase (CSD)