Gene: AT5G16230

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G16230
  • Transcript Identifier AT5G16230.1
  • Gene Type Coding gene
  • Location Chr5 : 5303394-5305944 : positive

Gene Family Information

  • ID HOM05D000941
  • #Genes/#Species 642/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G16230.1
  • uniprot Q9LF05

Descriptions

  • Description Plant stearoyl-acyl-carrier-protein desaturase family protein
  • Computational description Plant stearoyl-acyl-carrier-protein desaturase family protein; FUNCTIONS IN: acyl-[acyl-carrier-protein] desaturase activity, oxidoreductase activity, transition metal ion binding; INVOLVED IN: oxidation reduction, fatty acid metabolic process, fatty acid biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: M germinated pollen stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase-related (InterPro:IPR012348), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078), Fatty acid desaturase, type 2 (InterPro:IPR005067); BEST Arabidopsis thaliana protein match is: Plant stearoyl-acyl-carrier-protein desaturase family protein (TAIR:AT3G02610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006631
IEA
GOA Databasefatty acid metabolic process
GO:0006631
IBA
Gene Ontologyfatty acid metabolic process1
GO:0006631
IEA
InterProfatty acid metabolic process
GO:0006633
IEA
GOA Databasefatty acid biosynthetic process
GO:0006629
IEA
GOA Databaselipid metabolic process
GO:2000014
IMP
Gene Ontologyregulation of endosperm development2
GO:0055089
IMP
Gene Ontologyfatty acid homeostasis2
GO:0009960
IMP
Gene Ontologyendosperm development2
GO:0006636
IMP
Gene Ontologyunsaturated fatty acid biosynthetic process2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045300
IDA, IMP
IBA
IEA
Gene Ontologyacyl-[acyl-carrier-protein] desaturase activity1 2 3
GO:0045300
IEA
InterProacyl-[acyl-carrier-protein] desaturase activity
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0016491
IEA
InterProoxidoreductase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0102786
IEA
Gene Ontologystearoyl-[acp] desaturase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009536
IEA
GOA Databaseplastid
GO:0009507
IEA
GOA Databasechloroplast
GO:0009507
ISM
Gene Ontologychloroplast
GO:0009570
IBA
Gene Ontologychloroplast stroma1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012348 Ribonucleotide reductase-like
IPR009078 Ferritin-like superfamily
IPR005067 Fatty acid desaturase, type 2
Mapman id Description
5.1.7.2 Lipid metabolism.fatty acid biosynthesis.fatty acid desaturation.delta-9 stearoyl-ACP desaturase