Gene: AT5G15340
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G15340
- Transcript Identifier AT5G15340.1
- Gene Type Coding gene
- Location Chr5 : 4982273-4984144 : negative
Gene Family Information
- ID HOM05D000001
- #Genes/#Species 35287/100
- Phylogenetic origin
- ID ORTHO05D010108
- #Genes/#Species 76/66
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT5G15340.1
- uniprot Q9LXE8
Descriptions
- Description Pentatricopeptide repeat (PPR) superfamily protein
- Computational description Pentatricopeptide repeat (PPR) superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 30617 Blast hits to 12777 proteins in 204 species: Archae - 0; Bacteria - 4; Metazoa - 33; Fungi - 16; Plants - 30223; Viruses - 0; Other Eukaryotes - 341 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008270 | IEA | Gene Ontology | zinc ion binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0005515 | IEA | InterPro | protein binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005739 | IEA | GOA Database | mitochondrion | |
| GO:0005739 | ISM | Gene Ontology | mitochondrion |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |