Gene: AT5G15270

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G15270
  • Transcript Identifier AT5G15270.1
  • Gene Type Coding gene
  • Location Chr5 : 4958738-4960947 : positive

Gene Family Information

  • ID HOM05D000442
  • #Genes/#Species 1174/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G15270.1
  • uniprot Q0WNX3

Descriptions

  • Description RNA-binding KH domain-containing protein
  • Computational description RNA-binding KH domain-containing protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), K Homology (InterPro:IPR004087), K Homology, type 1 (InterPro:IPR004088); BEST Arabidopsis thaliana protein match is: RNA-binding KH domain-containing protein (TAIR:AT1G14170.3); Has 5625 Blast hits to 2559 proteins in 215 species: Archae - 0; Bacteria - 48; Metazoa - 3662; Fungi - 737; Plants - 967; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010468
IBA
Gene Ontologyregulation of gene expression1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
Gene OntologyRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0003729
IDA, HDA
IBA
Gene OntologymRNA binding1 2 3
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM, IBA
Gene Ontologynucleus1
GO:0005737
IBA
Gene Ontologycytoplasm1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036612 K Homology domain, type 1 superfamily
IPR004088 K Homology domain, type 1
IPR004087 K Homology domain
Mapman id Description
35.1 not assigned.annotated