Gene: AT5G14340

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G14340
  • Transcript Identifier AT5G14340.2
  • Gene Type Coding gene
  • Location Chr5 : 4624222-4624779 : positive

Gene Family Information

  • ID HOM05D000008
  • #Genes/#Species 9932/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G14340.2
  • symbol MYB40
  • Alias AtMYB40,myb domain protein 40
  • uniprot F4K6R6

Descriptions

  • Description myb domain protein 40
  • Computational description myb domain protein 40 (MYB40); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 20 (TAIR:AT1G66230.1); Has 8800 Blast hits to 8097 proteins in 536 species: Archae - 0; Bacteria - 0; Metazoa - 861; Fungi - 444; Plants - 5790; Viruses - 6; Other Eukaryotes - 1699 (source: NCBI BLink).
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
ISS
Gene OntologyDNA-binding transcription factor activity1
GO:0000976
IPI
Gene Ontologytranscription cis-regulatory region binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR017930 Myb domain
IPR009057 Homeobox-like domain superfamily
IPR001005 SANT/Myb domain
Mapman id Description
35.1 not assigned.annotated