Gene: AT5G13840

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G13840
  • Transcript Identifier AT5G13840.2
  • Gene Type Coding gene
  • Location Chr5 : 4468677-4470706 : negative

Gene Family Information

  • ID HOM05D000526
  • #Genes/#Species 1037/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G13840.2
  • symbol FZR3
  • Alias CCS52B,cell cycle switch protein 52 B
  • uniprot Q8LPL5

Descriptions

  • Description FIZZY-related 3
  • Computational description FIZZY-related 3 (FZR3); FUNCTIONS IN: signal transducer activity; INVOLVED IN: signal transduction; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: FIZZY-related 2 (TAIR:AT4G22910.1); Has 48305 Blast hits to 24690 proteins in 714 species: Archae - 60; Bacteria - 7363; Metazoa - 18902; Fungi - 10741; Plants - 5341; Viruses - 0; Other Eukaryotes - 5898 (source: NCBI BLink).
  • Computational description FIZZY-related 3 (FZR3); FUNCTIONS IN: signal transducer activity; INVOLVED IN: signal transduction; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: FIZZY-related 2 (TAIR:AT4G22910.1).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1904668
IEA
Gene Ontologypositive regulation of ubiquitin protein ligase activity
GO:1904668
IEA
InterPropositive regulation of ubiquitin protein ligase activity
GO:0051301
IEA
GOA Databasecell division
GO:0007049
IEA
GOA Databasecell cycle
GO:1905786
IBA
Gene Ontologypositive regulation of anaphase-promoting complex-dependent catabolic process1
GO:0031145
IBA
Gene Ontologyanaphase-promoting complex-dependent catabolic process1
GO:0016567
IEA
Gene Ontologyprotein ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0097027
IEA
GOA Databaseubiquitin-protein transferase activator activity
GO:0097027
IEA
InterProubiquitin-protein transferase activator activity
GO:0010997
IEA
GOA Databaseanaphase-promoting complex binding
GO:0010997
IBA
Gene Ontologyanaphase-promoting complex binding1
GO:0010997
IEA
InterProanaphase-promoting complex binding
GO:0005515
IPI
Gene Ontologyprotein binding2
GO:0005515
IEA
InterProprotein binding
GO:1990757
IBA
Gene Ontologyubiquitin ligase activator activity1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005680
IBA
Gene Ontologyanaphase-promoting complex1
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001680 WD40 repeat
IPR036322 WD40-repeat-containing domain superfamily
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR033010 The WD repeat Cdc20/Fizzy family
Mapman id Description
13.3.3.1.3 Cell cycle organisation.mitosis and meiosis.metaphase to anaphase transition.Anaphase-Promoting Complex/Cyclosome (APC/C)-dependent ubiquitination.activator protein (FZR)