Gene: AT5G12940

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G12940
  • Transcript Identifier AT5G12940.1
  • Gene Type Coding gene
  • Location Chr5 : 4087782-4088897 : positive

Gene Family Information

  • ID HOM05D002120
  • #Genes/#Species 315/90
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G12940.1
  • uniprot Q9LXU5

Descriptions

  • Description Leucine-rich repeat (LRR) family protein
  • Computational description Leucine-rich repeat (LRR) family protein; INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT3G20820.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007165
IC
Gene Ontologysignal transduction1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISM
Gene Ontologyplasma membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001611 Leucine-rich repeat
IPR032675 Leucine-rich repeat domain superfamily
IPR013210 Leucine-rich repeat-containing N-terminal, plant-type
Mapman id Description
35.1 not assigned.annotated