Gene: AT5G11840

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G11840
  • Transcript Identifier AT5G11840.1
  • Gene Type Coding gene
  • Location Chr5 : 3813610-3814805 : negative

Gene Family Information

  • ID HOM05D003166
  • #Genes/#Species 216/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G11840.1
  • uniprot B6IDH6

Descriptions

  • Description YCF36, putative (DUF1230)
  • Computational description Protein of unknown function (DUF1230); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1230 (InterPro:IPR009631); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1230) (TAIR:AT5G67370.1); Has 313 Blast hits to 313 proteins in 90 species: Archae - 0; Bacteria - 114; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008150
ND
Gene Ontologybiological_process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003674
ND
Gene Ontologymolecular_function

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast
GO:0009536
IEA
GOA Databaseplastid
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009631 CGLD27-like
Mapman id Description
35.1 not assigned.annotated