Gene: AT5G11510

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G11510
  • Transcript Identifier AT5G11510.1
  • Gene Type Coding gene
  • Location Chr5 : 3680452-3684684 : positive

Gene Family Information

  • ID HOM05D000119
  • #Genes/#Species 2812/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G11510.1
  • symbol MYB3R-4
  • Alias AtMYB3R4,myb domain protein 3R4
  • uniprot Q94FL9

Descriptions

  • Description myb domain protein 3r-4
  • Computational description myb domain protein 3r-4 (MYB3R-4); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Homeodomain-like protein (TAIR:AT4G32730.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006357
IEA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0045944
IEA
GOA Databasepositive regulation of transcription by RNA polymerase II
GO:0006355
IDA
IBA
TAS
Gene Ontologyregulation of transcription, DNA-templated1 2 3
GO:0000910
IDA
Gene Ontologycytokinesis4
GO:0032465
IMP, IGI
Gene Ontologyregulation of cytokinesis2 5
GO:1901181
IMP
Gene Ontologynegative regulation of cellular response to caffeine6
GO:0050832
IMP
Gene Ontologydefense response to fungus7
GO:0032875
IMP
Gene Ontologyregulation of DNA endoreduplication7
GO:0009620
IEP
Gene Ontologyresponse to fungus7
GO:0045893
IMP
Gene Ontologypositive regulation of transcription, DNA-templated2
GO:0009751
IEP
Gene Ontologyresponse to salicylic acid8

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000976
IPI
Gene Ontologytranscription cis-regulatory region binding9
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0000978
IBA
Gene OntologyRNA polymerase II cis-regulatory region sequence-specific DNA binding3
GO:0000981
IBA
Gene OntologyDNA-binding transcription factor activity, RNA polymerase II-specific3
GO:0005515
IPI
Gene Ontologyprotein binding10
GO:0043565
IDA
Gene Ontologysequence-specific DNA binding6
GO:0001228
IDA
Gene OntologyDNA-binding transcription activator activity, RNA polymerase II-specific2
GO:0003700
ISS
Gene OntologyDNA-binding transcription factor activity1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus3
GO:0009524
IDA
Gene Ontologyphragmoplast4
GO:0005819
IDA
Gene Ontologyspindle4

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001005 SANT/Myb domain
IPR017930 Myb domain
IPR009057 Homeobox-like domain superfamily
Mapman id Description
15.5.2.1 RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)