Gene: AT5G11420

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G11420
  • Transcript Identifier AT5G11420.1
  • Gene Type Coding gene
  • Location Chr5 : 3644655-3646991 : positive

Gene Family Information

  • ID HOM05D000636
  • #Genes/#Species 893/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G11420.1
  • uniprot Q9LYE7

Descriptions

  • Description transmembrane protein, putative (Protein of unknown function, DUF642)
  • Computational description FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF642 (InterPro:IPR006946), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF642 (TAIR:AT5G25460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008150
ND
Gene Ontologybiological_process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
ISM
Gene Ontologyextracellular region
GO:0005618
IDA
GOA Databasecell wall
GO:0005618
HDA
Gene Ontologycell wall2
GO:0005886
HDA
Gene Ontologyplasma membrane3
GO:0009505
IBA
Gene Ontologyplant-type cell wall4

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006946 Domain of unknown function DUF642
IPR008979 Galactose-binding-like domain superfamily
Mapman id Description
35.1 not assigned.annotated