Gene: AT5G10790

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G10790
  • Transcript Identifier AT5G10790.2
  • Gene Type Coding gene
  • Location Chr5 : 3411025-3412559 : positive

Gene Family Information

  • ID HOM05D000344
  • #Genes/#Species 1371/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G10790.2
  • symbol UBP22
  • uniprot Q9LEW0

Descriptions

  • Description ubiquitin-specific protease 22
  • Computational description ubiquitin-specific protease 22 (UBP22); FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity, zinc ion binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, UBP-type (InterPro:IPR001607), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 23 (TAIR:AT5G57990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006511
IEA
Gene Ontologyubiquitin-dependent protein catabolic process
GO:0016579
IEA
Gene Ontologyprotein deubiquitination
GO:0016579
IEA
InterProprotein deubiquitination
GO:0006508
IEA
GOA Databaseproteolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004843
IEA
Gene Ontologythiol-dependent deubiquitinase
GO:0004843
IEA
InterProthiol-dependent deubiquitinase
GO:0008270
IEA
Gene Ontologyzinc ion binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0008234
IEA
GOA Databasecysteine-type peptidase activity
GO:0008233
IEA
GOA Databasepeptidase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus
GO:0070461
IPI
Gene OntologySAGA-type complex1
GO:0005654
IEA
GOA Databasenucleoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR038765 Papain-like cysteine peptidase superfamily
IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase
Mapman id Description
15.3.4.3.2.2 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.SAGA complex.DUB histone deubiquitinating module.component UBP22
19.2.3.1.1.7 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.ubiquitin deconjugation.UBP deubiquitinase activities.deubiquitinase (UBP22)