Gene: AT5G10400

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G10400
  • Transcript Identifier AT5G10400.1
  • Gene Type Coding gene
  • Location Chr5 : 3270478-3270888 : negative

Gene Family Information

  • ID HOM05D000288
  • #Genes/#Species 1531/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G10400.1
  • Alias H3.1,histone 3.1

Descriptions

  • Description Histone superfamily protein
  • Computational description Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: chloroplast, nucleosome; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G10390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0046982
IEA
InterProprotein heterodimerization activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G65360

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0005886
HDA
Gene Ontologyplasma membrane1
GO:0000786
IEA
InterPronucleosome
GO:0010369
ISO
PLAZA Integrative Orthologychromocenter AT5G65360

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000164 Histone H3/CENP-A
IPR009072 Histone-fold
IPR007125 Histone H2A/H2B/H3
Mapman id Description
12.1.1.3 Chromatin organisation.chromatin structure.DNA wrapping.histone (H3)