Gene: AT5G10270

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G10270
  • Transcript Identifier AT5G10270.1
  • Gene Type Coding gene
  • Location Chr5 : 3221715-3224674 : negative

Gene Family Information

  • ID HOM05D000084
  • #Genes/#Species 3652/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G10270.1
  • symbol CDKC%3B1
  • full_name cyclin-dependent kinase C%3B1
  • uniprot Q9LFT8

Descriptions

  • Description cyclin-dependent kinase C;1
  • Computational description cyclin-dependent kinase C;1 (CDKC;1); FUNCTIONS IN: kinase activity; INVOLVED IN: response to virus, leaf development; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cyclin dependent kinase group C2 (TAIR:AT5G64960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006468
IEA
GOA Databaseprotein phosphorylation
GO:0006468
IBA
Gene Ontologyprotein phosphorylation1
GO:0006468
IEA
InterProprotein phosphorylation
GO:0016310
IEA
GOA Databasephosphorylation
GO:0051726
IEA
GOA Databaseregulation of cell cycle
GO:0032968
IBA
Gene Ontologypositive regulation of transcription elongation from RNA polymerase II promoter1
GO:0070816
IBA
Gene Ontologyphosphorylation of RNA polymerase II C-terminal domain1
GO:0048366
IGI
Gene Ontologyleaf development2
GO:0009615
IEP
Gene Ontologyresponse to virus2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0106310
IEA
GOA Databaseprotein serine kinase activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0004672
IEA
GOA Databaseprotein kinase activity
GO:0004672
IEA
InterProprotein kinase activity
GO:0016301
IEA
GOA Databasekinase activity
GO:0016301
IDA
Gene Ontologykinase activity2
GO:0004674
IEA
GOA Databaseprotein serine/threonine kinase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0004693
IEA
GOA Databasecyclin-dependent protein serine/threonine kinase activity
GO:0004693
IBA
Gene Ontologycyclin-dependent protein serine/threonine kinase activity1
GO:0008353
IEA
GOA DatabaseRNA polymerase II CTD heptapeptide repeat kinase activity
GO:0008353
IBA
Gene OntologyRNA polymerase II CTD heptapeptide repeat kinase activity1
GO:0106311
IEA
GOA Databaseprotein threonine kinase activity
GO:0005515
IPI
Gene Ontologyprotein binding3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
IDA
GOA Databasecytosol
GO:0005634
ISM, IBA
Gene Ontologynucleus1
GO:0000307
IBA
Gene Ontologycyclin-dependent protein kinase holoenzyme complex1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000719 Protein kinase domain
IPR011009 Protein kinase-like domain superfamily
Mapman id Description
13.1.1.2.3 Cell cycle organisation.cell cycle control.cyclin-dependent regulation.cyclin-dependent protein kinase complex.catalytic component CDKC
15.3.2.1.1 RNA biosynthesis.RNA polymerase II-dependent transcription.RNA polymerase-II phosphorylation/dephosphorylation.CTDK-I protein kinase complex.catalytic component CDKC-1/CTK1
18.4.3.1.3 Protein modification.phosphorylation.CMGC protein kinase superfamily.CDK protein kinase families.protein kinase (CDKC)