Gene: AT5G10000

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G10000
  • Transcript Identifier AT5G10000.1
  • Gene Type Coding gene
  • Location Chr5 : 3126709-3127155 : positive

Gene Family Information

  • ID HOM05D001025
  • #Genes/#Species 592/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G10000.1
  • symbol FD4
  • Alias ATFD4,ferredoxin 4
  • uniprot Q9FIA7

Descriptions

  • Description ferredoxin 4
  • Computational description ferredoxin 4 (FD4); FUNCTIONS IN: electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding; INVOLVED IN: electron transport chain; CONTAINS InterPro DOMAIN/s: 2Fe-2S ferredoxin, iron-sulphur binding site (InterPro:IPR006058), Ferredoxin (InterPro:IPR001041), Ferredoxin [2Fe-2S], plant (InterPro:IPR010241), Beta-grasp fold, ferredoxin-type (InterPro:IPR012675); BEST Arabidopsis thaliana protein match is: 2Fe-2S ferredoxin-like superfamily protein (TAIR:AT1G60950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009416
ISO
PLAZA Integrative Orthologyresponse to light stimulus Zm00001eb063710
GO:0022900
IEA
Gene Ontologyelectron transport chain
GO:0022900
IEA
InterProelectron transport chain

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding Zm00001eb063710
GO:0051537
IEA
GOA Database2 iron, 2 sulfur cluster binding
GO:0051537
IEA
InterPro2 iron, 2 sulfur cluster binding
GO:0009055
IEA
Gene Ontologyelectron transfer activity
GO:0009055
IEA
InterProelectron transfer activity
GO:0051536
IEA
GOA Databaseiron-sulfur cluster binding
GO:0051536
IEA
InterProiron-sulfur cluster binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009578
ISO
PLAZA Integrative Orthologyetioplast stroma Zm00001eb063710
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma Zm00001eb063710
GO:0009536
IEA
GOA Databaseplastid
GO:0009536
IBA
Gene Ontologyplastid1
GO:0009507
IEA
GOA Databasechloroplast
GO:0009507
ISM
Gene Ontologychloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012675 Beta-grasp domain superfamily
IPR036010 2Fe-2S ferredoxin-like superfamily
IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain
IPR010241 Ferredoxin [2Fe-2S], plant
Mapman id Description
1.1.5.1.1 Photosynthesis.photophosphorylation.linear electron flow.ferredoxin electron carrier activities.NADP-reduction-targeted ferredoxin (Fd)