Gene: AT5G08520

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G08520
  • Transcript Identifier AT5G08520.1
  • Gene Type Coding gene
  • Location Chr5 : 2755470-2757741 : negative

Gene Family Information

  • ID HOM05D000095
  • #Genes/#Species 3348/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G08520.1
  • uniprot Q9FNN6

Descriptions

  • Description Duplicated homeodomain-like superfamily protein
  • Computational description Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Homeodomain-like transcriptional regulator (TAIR:AT5G23650.1); Has 2184 Blast hits to 2148 proteins in 187 species: Archae - 0; Bacteria - 10; Metazoa - 113; Fungi - 60; Plants - 1413; Viruses - 0; Other Eukaryotes - 588 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010116
IMP
Gene Ontologypositive regulation of abscisic acid biosynthetic process1
GO:0009738
IEA
GOA Databaseabscisic acid-activated signaling pathway
GO:0009751
IEP
IBA
Gene Ontologyresponse to salicylic acid2 3
GO:0009739
IEP
IBA
Gene Ontologyresponse to gibberellin2 3
GO:1905615
IMP
Gene Ontologypositive regulation of developmental vegetative growth1
GO:1901371
IMP
Gene Ontologyregulation of leaf morphogenesis1
GO:1901001
IMP
Gene Ontologynegative regulation of response to salt stress1
GO:0045893
IDA
Gene Ontologypositive regulation of transcription, DNA-templated1
GO:0009787
IMP
Gene Ontologyregulation of abscisic acid-activated signaling pathway1
GO:0009651
IEP
Gene Ontologyresponse to salt stress1
GO:0009414
IEP
Gene Ontologyresponse to water deprivation1
GO:0006355
TAS
Gene Ontologyregulation of transcription, DNA-templated4

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0005515
IPI
Gene Ontologyprotein binding5
GO:0003700
IDA
ISS
Gene OntologyDNA-binding transcription factor activity1 4
GO:0000976
IPI
Gene Ontologytranscription cis-regulatory region binding6

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM
Gene Ontologynucleus1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR017930 Myb domain
IPR009057 Homeobox-like domain superfamily
IPR001005 SANT/Myb domain
IPR006447 Myb domain, plants
Mapman id Description
15.5.2.2 RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB-related)