Gene: AT5G08230
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G08230
- Transcript Identifier AT5G08230.1
- Gene Type Coding gene
- Location Chr5 : 2643846-2649788 : negative
Gene Family Information
- ID HOM05D001820
- #Genes/#Species 360/96
- Phylogenetic origin
- ID ORTHO05D001794
- #Genes/#Species 354/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT5G08230.1
- Alias HULK1,HUA2 LIKE 1
- uniprot Q9LEY4
Descriptions
- Description tudor/PWWP/MBT domain protein
- Computational description Tudor/PWWP/MBT domain-containing protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF618 (InterPro:IPR006903), RNA polymerase II, large subunit, CTD (InterPro:IPR006569), PWWP (InterPro:IPR000313); BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT domain-containing protein (TAIR:AT5G23150.1); Has 47075 Blast hits to 25226 proteins in 1376 species: Archae - 78; Bacteria - 7272; Metazoa - 16776; Fungi - 5193; Plants - 9119; Viruses - 1951; Other Eukaryotes - 6686 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006357 | IBA | Gene Ontology | regulation of transcription by RNA polymerase II | 1 |
| GO:0006397 | IEA | GOA Database | mRNA processing | |
| GO:0009908 | IEA | GOA Database | flower development |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003690 | IBA | Gene Ontology | double-stranded DNA binding | 1 |
| GO:0003712 | IBA | Gene Ontology | transcription coregulator activity | 1 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IDA ISM, IBA | Gene Ontology | nucleus | 1 2 |
| GO:0009506 | IDA | GOA Database | plasmodesma | |
| GO:0009506 | HDA | Gene Ontology | plasmodesma | 3 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.47 | RNA biosynthesis.transcriptional regulation.transcription factor (HUA2) |