Gene: AT5G06960

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G06960
  • Transcript Identifier AT5G06960.2
  • Gene Type Coding gene
  • Location Chr5 : 2155742-2157400 : positive

Gene Family Information

  • ID HOM05D000382
  • #Genes/#Species 1280/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G06960.2
  • symbol OBF5
  • Alias TGA5,TGACG MOTIF-BINDING FACTOR 5
  • uniprot Q39163

Descriptions

  • Description OCS-element binding factor 5
  • Computational description OCS-element binding factor 5 (OBF5); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGACG motif-binding factor 6 (TAIR:AT3G12250.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
  • Computational description OCS-element binding factor 5 (OBF5); CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: TGACG motif-binding factor 6 (TAIR:AT3G12250.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009410
IGI
Gene Ontologyresponse to xenobiotic stimulus1
GO:0006351
IEA
Gene Ontologytranscription, DNA-templated
GO:0006351
IEA
InterProtranscription, DNA-templated
GO:0006355
IEA
Gene Ontologyregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0098542
TAS
Gene Ontologydefense response to other organism2
GO:0009863
IPI
Gene Ontologysalicylic acid mediated signaling pathway3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043565
IEA
Gene Ontologysequence-specific DNA binding
GO:0043565
IEA
InterProsequence-specific DNA binding
GO:0003700
ISS
IEA
Gene OntologyDNA-binding transcription factor activity4
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IDA
NAS
Gene OntologyDNA binding5
GO:0000976
IPI
Gene Ontologytranscription cis-regulatory region binding6
GO:0042802
IPI
Gene Ontologyidentical protein binding7
GO:0005515
IPI
Gene Ontologyprotein binding3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004827 Basic-leucine zipper domain
IPR025422 Transcription factor TGA like domain
Mapman id Description
15.5.4.4.1 RNA biosynthesis.transcriptional regulation.bZIP transcription factor superfamily.TGA transcription factor activity.transcription factor (TGA)
26.9.3.1.2 External stimuli response.pathogen.defense mechanisms.systemic acquired resistance (SAR).NPR1-interactive transcription factor (TGA)