Gene: AT5G06810
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G06810
- Transcript Identifier AT5G06810.1
- Gene Type Coding gene
- Location Chr5 : 2108493-2110259 : positive
Gene Family Information
- ID HOM05D001504
- #Genes/#Species 421/95
- Phylogenetic origin
- ID ORTHO05D001394
- #Genes/#Species 416/95
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid AT5G06810.1
- uniprot F4K588
Descriptions
- Description transcription termination factor family protein
- Computational description Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT4G19650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | Gene Ontology | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0006353 | IEA | GOA Database | DNA-templated transcription, termination | |
| GO:0009658 | IBA | GOA Database | chloroplast organization | |
| GO:0032502 | IBA | GOA Database | developmental process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003690 | IEA | Gene Ontology | double-stranded DNA binding | |
| GO:0003690 | IEA | InterPro | double-stranded DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005739 | HDA ISM | Gene Ontology | mitochondrion | 1 |
| GO:0009536 | HDA | Gene Ontology | plastid | 1 |
| GO:0009507 | IBA | GOA Database | chloroplast |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.6.2.2 | RNA biosynthesis.organelle machinery.transcriptional regulation.transcription factor (mTERF) |