Gene: AT5G05850

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G05850
  • Transcript Identifier AT5G05850.1
  • Gene Type Coding gene
  • Location Chr5 : 1762691-1764609 : negative

Gene Family Information

  • ID HOM05D002488
  • #Genes/#Species 273/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G05850.1
  • symbol PIRL1
  • uniprot Q9FFJ3

Descriptions

  • Description plant intracellular ras group-related LRR 1
  • Computational description plant intracellular ras group-related LRR 1 (PIRL1); INVOLVED IN: microgametogenesis, pollen development; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: plant intracellular ras group-related LRR 9 (TAIR:AT3G11330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009555
IGI
Gene Ontologypollen development1
GO:0055046
IGI
Gene Ontologymicrogametogenesis1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISM
Gene Ontologyplasma membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003591 Leucine-rich repeat, typical subtype
IPR032675 Leucine-rich repeat domain superfamily
IPR001611 Leucine-rich repeat
Mapman id Description
35.1 not assigned.annotated