Gene: AT5G02870

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G02870
  • Transcript Identifier AT5G02870.1
  • Gene Type Coding gene
  • Location Chr5 : 657830-659526 : positive

Gene Family Information

  • ID HOM05D002062
  • #Genes/#Species 323/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G02870.1
  • Alias RPL4,ribosomal large subunit 4
  • uniprot P49691

Descriptions

  • Description Ribosomal protein L4/L1 family
  • Computational description Ribosomal protein L4/L1 family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L4/L1e (InterPro:IPR002136), Ribosomal protein L4/L1e, eukaryotic/archaeal, conserved site (InterPro:IPR013000); BEST Arabidopsis thaliana protein match is: Ribosomal protein L4/L1 family (TAIR:AT3G09630.1); Has 1138 Blast hits to 1137 proteins in 402 species: Archae - 316; Bacteria - 12; Metazoa - 270; Fungi - 177; Plants - 117; Viruses - 0; Other Eukaryotes - 246 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
Gene Ontologytranslation
GO:0006412
IEA
InterProtranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IDA
IBA
GOA Databasestructural constituent of ribosome
GO:0003735
IEA
Gene Ontologystructural constituent of ribosome
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003723
IBA
GOA DatabaseRNA binding
GO:0003729
IDA, HDA
Gene OntologymRNA binding1 2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
IDA
GOA Databasenucleolus
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IEA
InterProribosome
GO:0022625
IDA
IBA
GOA Databasecytosolic large ribosomal subunit
GO:0022625
HDA
Gene Ontologycytosolic large ribosomal subunit3
GO:0009506
IDA
GOA Databaseplasmodesma
GO:0005829
IDA
GOA Databasecytosol
GO:0022626
IDA
GOA Databasecytosolic ribosome
GO:0022626
HDA
Gene Ontologycytosolic ribosome4
GO:0005886
IDA
GOA Databaseplasma membrane
GO:0005886
HDA
Gene Ontologyplasma membrane5
GO:0005773
IDA
GOA Databasevacuole
GO:0005774
IDA
GOA Databasevacuolar membrane
GO:0042788
IDA
GOA Databasepolysomal ribosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR023574 Ribosomal protein L4 domain superfamily
IPR025755 60S ribosomal protein L4, C-terminal domain
IPR002136 Ribosomal protein L4/L1e
Mapman id Description
17.1.2.1.2 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL4