Gene: AT4G39970

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G39970
  • Transcript Identifier AT4G39970.1
  • Gene Type Coding gene
  • Location Chr4 : 18536678-18538429 : negative

Gene Family Information

  • ID HOM05D002693
  • #Genes/#Species 255/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G39970.1
  • uniprot Q680K2

Descriptions

  • Description Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
  • Computational description Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: hydrolase activity, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT3G48420.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0016787
IEA
InterProhydrolase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IDA
IEA
GOA Databasechloroplast
GO:0009507
HDA
ISM
Gene Ontologychloroplast1
GO:0009941
IDA
GOA Databasechloroplast envelope
GO:0009941
HDA
Gene Ontologychloroplast envelope2
GO:0009570
IDA
GOA Databasechloroplast stroma
GO:0009570
HDA
Gene Ontologychloroplast stroma3
GO:0005886
HDA
Gene Ontologyplasma membrane4
GO:0009536
IEA
GOA Databaseplastid

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR023214 HAD superfamily
IPR036412 HAD-like superfamily
IPR006439 HAD hydrolase, subfamily IA
IPR041492 Haloacid dehalogenase-like hydrolase
IPR044999 Protein CbbY-like
IPR023198 Phosphoglycolate phosphatase-like, domain 2
Mapman id Description
35.1 not assigned.annotated