Gene: AT4G39950

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G39950
  • Transcript Identifier AT4G39950.2
  • Gene Type Coding gene
  • Location Chr4 : 18525115-18527284 : positive

Gene Family Information

  • ID HOM05D000016
  • #Genes/#Species 7260/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G39950.2
  • symbol CYP79B2
  • full_name cytochrome P450%2C family 79%2C subfamily B%2C polypeptide 2
  • uniprot O81346

Descriptions

  • Description cytochrome P450, family 79, subfamily B, polypeptide 2
  • Computational description cytochrome P450, family 79, subfamily B, polypeptide 2 (CYP79B2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: in 8 processes; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 79, subfamily B, polypeptide 3 (TAIR:AT2G22330.1); Has 28507 Blast hits to 28366 proteins in 1550 species: Archae - 44; Bacteria - 2565; Metazoa - 10705; Fungi - 5395; Plants - 8898; Viruses - 0; Other Eukaryotes - 900 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009682
IMP
Gene Ontologyinduced systemic resistance1
GO:0006952
IMP, IEP
Gene Ontologydefense response2 3
GO:0009625
IEP
Gene Ontologyresponse to insect4
GO:0009414
IEP
Gene Ontologyresponse to water deprivation4
GO:0009617
IMP, IEP
Gene Ontologyresponse to bacterium1 5
GO:0002229
IGI
Gene Ontologydefense response to oomycetes6
GO:0052544
IMP
Gene Ontologydefense response by callose deposition in cell wall7
GO:0042742
IMP
Gene Ontologydefense response to bacterium7
GO:0010120
TAS
Gene Ontologycamalexin biosynthetic process8
GO:0009684
IMP, IGI
Gene Ontologyindoleacetic acid biosynthetic process9 10
GO:0006569
IDA
Gene Ontologytryptophan catabolic process11

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0020037
IEA
Gene Ontologyheme binding
GO:0020037
IEA
InterProheme binding
GO:0016705
IEA
Gene Ontologyoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0016705
IEA
InterProoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0005506
IEA
Gene Ontologyiron ion binding
GO:0005506
IEA
InterProiron ion binding
GO:0004497
IEA
GOA Databasemonooxygenase activity
GO:0004497
IEA
InterPromonooxygenase activity
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016709
IBA
Gene Ontologyoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen12

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IBA
Gene Ontologymembrane12
GO:0009507
ISM
NAS
Gene Ontologychloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036396 Cytochrome P450 superfamily
IPR001128 Cytochrome P450
IPR002401 Cytochrome P450, E-class, group I
Mapman id Description
30.1.1.6.2 Clade-specific metabolism.Brassicaceae.glucosinolate biosynthesis.benzenic and indolic core structure.tryptophan N-monooxygenase