Gene: AT4G38860
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G38860
- Transcript Identifier AT4G38860.1
- Gene Type Coding gene
- Location Chr4 : 18130357-18130674 : positive
Gene Family Information
- ID HOM05D000057
- #Genes/#Species 4281/93
- Phylogenetic origin
- ID ORTHO05D000021
- #Genes/#Species 4050/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT4G38860.1
- Alias SAUR16,SMALL AUXIN UPREGULATED RNA 16
- uniprot Q9T0J3
Descriptions
- Description SAUR-like auxin-responsive protein family
- Computational description SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G21220.1); Has 1286 Blast hits to 1273 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1285; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009733 | IEA | Gene Ontology | response to auxin | |
| GO:0009733 | IEA | InterPro | response to auxin | |
| GO:0009409 | ISO | PLAZA Integrative Orthology | response to cold | Solyc01g110620.1 |
| GO:0009651 | ISO | PLAZA Integrative Orthology | response to salt stress | Solyc01g110620.1 |
| GO:0009734 | ISO | PLAZA Integrative Orthology | auxin-activated signaling pathway | Solyc01g110620.1 |
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | Solyc01g110620.1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003674 | ND | Gene Ontology | molecular_function |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005739 | ISM | Gene Ontology | mitochondrion |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR003676 | Small auxin-up RNA |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |