Gene: AT4G36540

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G36540
  • Transcript Identifier AT4G36540.1
  • Gene Type Coding gene
  • Location Chr4 : 17243699-17244965 : positive

Gene Family Information

  • ID HOM05D000194
  • #Genes/#Species 2004/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G36540.1
  • symbol BEE2
  • uniprot Q93VJ4

Descriptions

  • Description BR enhanced expression 2
  • Computational description BR enhanced expression 2 (BEE2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G18300.2); Has 2056 Blast hits to 2048 proteins in 102 species: Archae - 0; Bacteria - 0; Metazoa - 23; Fungi - 31; Plants - 2000; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
TAS
Gene Ontologyregulation of transcription, DNA-templated1
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0045824
IMP
Gene Ontologynegative regulation of innate immune response2
GO:0006351
IMP
Gene Ontologytranscription, DNA-templated3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IEA
GOA DatabaseDNA-binding transcription factor activity
GO:0003700
ISS, IBA
Gene OntologyDNA-binding transcription factor activity1 4
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0046983
IEA
Gene Ontologyprotein dimerization activity
GO:0046983
IEA
InterProprotein dimerization activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IDA
Gene OntologyDNA binding3
GO:0005515
IPI
Gene Ontologyprotein binding5

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus4

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036638 Helix-loop-helix DNA-binding domain superfamily
IPR024097 Basic helix-loop-helix leucine zipper transcription factor
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
IPR031064 Basic helix-loop-helix (bHLH) transcription factors BEE-like, plant
Mapman id Description
15.5.30 RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)
26.1.2.1.2 External stimuli response.light.UV-A/blue light.cryptochrome-mediated photoperception.transcriptional regulator (CIB)