Gene: AT4G35610
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G35610
- Transcript Identifier AT4G35610.1
- Gene Type Coding gene
- Location Chr4 : 16899410-16900225 : negative
Gene Family Information
- ID HOM05D008569
- #Genes/#Species 49/29
- Phylogenetic origin
- ID ORTHO05D010111
- #Genes/#Species 76/44
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid AT4G35610.1
- uniprot O81793
Descriptions
- Description zinc finger (C2H2 type) family protein
- Computational description zinc finger (C2H2 type) family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type) family protein (TAIR:AT4G35700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | TAS | Gene Ontology | regulation of transcription, DNA-templated | 1 |
| GO:0009723 | IEP | Gene Ontology | response to ethylene | 2 |
| GO:0045892 | IPI | Gene Ontology | negative regulation of transcription, DNA-templated | 2 |
| GO:0048235 | ISO | PLAZA Tree-based Orthology | pollen sperm cell differentiation | AT4G35700 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003700 | ISS | Gene Ontology | DNA-binding transcription factor activity | 1 |
| GO:0005515 | IPI | Gene Ontology | protein binding | 3 |
| GO:0003729 | IDA | Gene Ontology | mRNA binding | 4 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IDA | GOA Database | nucleus | |
| GO:0005634 | HDA ISM | Gene Ontology | nucleus | 5 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
No InterPro domains detected for this gene.
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |