Gene: AT4G35350
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G35350
- Transcript Identifier AT4G35350.1
- Gene Type Coding gene
- Location Chr4 : 16810529-16811875 : positive
Gene Family Information
- ID HOM05D000069
- #Genes/#Species 3952/100
- Phylogenetic origin
- ID ORTHO05D000060
- #Genes/#Species 2647/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT4G35350.1
- symbol XCP1
- uniprot O65493
Descriptions
- Description xylem cysteine peptidase 1
- Computational description xylem cysteine peptidase 1 (XCP1); FUNCTIONS IN: cysteine-type endopeptidase activity, cysteine-type peptidase activity; INVOLVED IN: proteolysis, developmental programmed cell death; LOCATED IN: nucleus, plant-type vacuole; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: xylem cysteine peptidase 2 (TAIR:AT1G20850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006508 | IEA | Gene Ontology | proteolysis | |
| GO:0006508 | IEA | InterPro | proteolysis | |
| GO:0051603 | IBA | Gene Ontology | proteolysis involved in cellular protein catabolic process | 1 |
| GO:0010623 | IMP | Gene Ontology | programmed cell death involved in cell development | 2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008234 | IEA | Gene Ontology | cysteine-type peptidase activity | |
| GO:0008234 | IEA | InterPro | cysteine-type peptidase activity | |
| GO:0008233 | IEA | GOA Database | peptidase activity | |
| GO:0016787 | IEA | GOA Database | hydrolase activity | |
| GO:0004197 | IBA | Gene Ontology | cysteine-type endopeptidase activity | 1 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005615 | IBA | Gene Ontology | extracellular space | 1 |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0005634 | IDA | GOA Database | nucleus | |
| GO:0005634 | HDA | Gene Ontology | nucleus | 3 |
| GO:0005886 | IEA | GOA Database | plasma membrane | |
| GO:0005773 | IEA | GOA Database | vacuole | |
| GO:0005576 | ISM | Gene Ontology | extracellular region | |
| GO:0005764 | IBA | Gene Ontology | lysosome | 1 |
| GO:0000325 | IDA | Gene Ontology | plant-type vacuole | 4 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |