Gene: AT4G35260
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G35260
- Transcript Identifier AT4G35260.1
- Gene Type Coding gene
- Location Chr4 : 16774494-16776233 : negative
Gene Family Information
- ID HOM05D001144
- #Genes/#Species 541/99
- Phylogenetic origin
- ID ORTHO05D002615
- #Genes/#Species 275/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT4G35260.1
- symbol IDH1
- Alias IDH-I,isocitrate dehydrogenase I
- uniprot Q8LFC0
Descriptions
- Description isocitrate dehydrogenase 1
- Computational description isocitrate dehydrogenase 1 (IDH1); CONTAINS InterPro DOMAIN/s: Isocitrate/isopropylmalate dehydrogenase (InterPro:IPR001804), Isocitrate dehydrogenase NAD-dependent, mitochondrial (InterPro:IPR004434); BEST Arabidopsis thaliana protein match is: isocitrate dehydrogenase subunit 2 (TAIR:AT2G17130.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006099 | IEA | GOA Database | tricarboxylic acid cycle | |
| GO:0006099 | IBA TAS | Gene Ontology | tricarboxylic acid cycle | 1 2 |
| GO:0006099 | IEA | InterPro | tricarboxylic acid cycle | |
| GO:0006102 | IMP IBA | Gene Ontology | isocitrate metabolic process | 1 2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004449 | IEA | GOA Database | isocitrate dehydrogenase (NAD+) activity | |
| GO:0004449 | IMP | Gene Ontology | isocitrate dehydrogenase (NAD+) activity | 1 |
| GO:0004449 | IEA | InterPro | isocitrate dehydrogenase (NAD+) activity | |
| GO:0016616 | IEA | GOA Database | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | |
| GO:0016616 | IEA | InterPro | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | |
| GO:0016491 | IEA | GOA Database | oxidoreductase activity | |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0008270 | IDA | GOA Database | zinc ion binding | |
| GO:0008270 | HDA | Gene Ontology | zinc ion binding | 3 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005739 | IDA IEA | GOA Database | mitochondrion | |
| GO:0005739 | HDA IBA | Gene Ontology | mitochondrion | 2 4 |
| GO:0009507 | ISM | Gene Ontology | chloroplast | |
| GO:0005886 | HDA | Gene Ontology | plasma membrane | 5 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 2.3.3.2 | Cellular respiration.tricarboxylic acid cycle.isocitrate dehydrogenase heterodimer.regulatory component |