Gene: AT4G34960
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G34960
- Transcript Identifier AT4G34960.1
- Gene Type Coding gene
- Location Chr4 : 16648865-16650646 : positive
Gene Family Information
- ID HOM05D000144
- #Genes/#Species 2569/100
- Phylogenetic origin
- ID ORTHO05D005908
- #Genes/#Species 150/89
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT4G34960.1
- uniprot O49605
Descriptions
- Description Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
- Computational description Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: Golgi apparatus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: cyclophilin 5 (TAIR:AT2G29960.1); Has 16085 Blast hits to 16059 proteins in 2650 species: Archae - 108; Bacteria - 6649; Metazoa - 2891; Fungi - 1367; Plants - 1258; Viruses - 4; Other Eukaryotes - 3808 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000413 | IBA IEA | Gene Ontology | protein peptidyl-prolyl isomerization | 1 |
| GO:0000413 | IEA | InterPro | protein peptidyl-prolyl isomerization | |
| GO:0006457 | IBA IEA | Gene Ontology | protein folding | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016018 | IBA | Gene Ontology | cyclosporin A binding | 1 |
| GO:0003755 | IBA IEA | Gene Ontology | peptidyl-prolyl cis-trans isomerase activity | 1 |
| GO:0003755 | IEA | InterPro | peptidyl-prolyl cis-trans isomerase activity | |
| GO:0016853 | IEA | GOA Database | isomerase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005802 | IDA | GOA Database | trans-Golgi network | |
| GO:0005802 | HDA | Gene Ontology | trans-Golgi network | 2 |
| GO:0005768 | IDA | GOA Database | endosome | |
| GO:0005768 | HDA | Gene Ontology | endosome | 2 |
| GO:0005794 | IDA | GOA Database | Golgi apparatus | |
| GO:0005794 | HDA | Gene Ontology | Golgi apparatus | 3 |
| GO:0005783 | IEA | GOA Database | endoplasmic reticulum | |
| GO:0043231 | IBA | Gene Ontology | intracellular membrane-bounded organelle | 1 |
| GO:0005737 | IBA | Gene Ontology | cytoplasm | 1 |
| GO:0005797 | HDA | Gene Ontology | Golgi medial cisterna | 4 |
| GO:0009507 | ISM | Gene Ontology | chloroplast |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 18.13.1 | Protein modification.protein folding.protein folding catalyst (Cyclophilin) |