Gene: AT4G34870
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G34870
- Transcript Identifier AT4G34870.1
- Gene Type Coding gene
- Location Chr4 : 16614451-16614969 : positive
Gene Family Information
- ID HOM05D000144
- #Genes/#Species 2569/100
- Phylogenetic origin
- ID ORTHO05D000392
- #Genes/#Species 1007/100
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT4G34870.1
- symbol ROC5
- Alias ATCYP1,ARABIDOPSIS THALIANA CYCLOPHILIN 1
- uniprot Q42406
Descriptions
- Description rotamase cyclophilin 5
- Computational description rotamase cyclophilin 5 (ROC5); FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, signal transduction; LOCATED IN: cytosol, apoplast, chloroplast, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: rotamase CYP 3 (TAIR:AT2G16600.1); Has 16787 Blast hits to 16755 proteins in 2701 species: Archae - 108; Bacteria - 6977; Metazoa - 2940; Fungi - 1375; Plants - 1301; Viruses - 4; Other Eukaryotes - 4082 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006457 | IEA | GOA Database | protein folding | |
| GO:0006457 | IBA | Gene Ontology | protein folding | 1 |
| GO:0000413 | IEA | GOA Database | protein peptidyl-prolyl isomerization | |
| GO:0000413 | IBA | Gene Ontology | protein peptidyl-prolyl isomerization | 1 |
| GO:0000413 | IEA | InterPro | protein peptidyl-prolyl isomerization | |
| GO:0007165 | ISS | Gene Ontology | signal transduction | 2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003755 | IEA | GOA Database | peptidyl-prolyl cis-trans isomerase activity | |
| GO:0003755 | ISS, IBA | Gene Ontology | peptidyl-prolyl cis-trans isomerase activity | 1 2 |
| GO:0003755 | IEA | InterPro | peptidyl-prolyl cis-trans isomerase activity | |
| GO:0016853 | IEA | GOA Database | isomerase activity | |
| GO:0016018 | IBA | Gene Ontology | cyclosporin A binding | 1 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | IDA | GOA Database | cytosol | |
| GO:0005829 | HDA ISS, IBA | Gene Ontology | cytosol | 1 2 3 |
| GO:0048046 | IDA | GOA Database | apoplast | |
| GO:0048046 | HDA | Gene Ontology | apoplast | 4 |
| GO:0009507 | IDA | GOA Database | chloroplast | |
| GO:0009507 | HDA | Gene Ontology | chloroplast | 5 |
| GO:0005886 | IDA | GOA Database | plasma membrane | |
| GO:0005886 | HDA IBA | Gene Ontology | plasma membrane | 1 6 |
| GO:0005774 | IDA | GOA Database | vacuolar membrane | |
| GO:0005794 | IDA | GOA Database | Golgi apparatus | |
| GO:0005794 | HDA | Gene Ontology | Golgi apparatus | 7 |
| GO:0005737 | IEA | GOA Database | cytoplasm | |
| GO:0005737 | ISM, IBA | Gene Ontology | cytoplasm | 1 |
| GO:0000325 | HDA | Gene Ontology | plant-type vacuole | 8 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 18.13.1 | Protein modification.protein folding.protein folding catalyst (Cyclophilin) |