Gene: AT4G34660
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G34660
- Transcript Identifier AT4G34660.1
- Gene Type Coding gene
- Location Chr4 : 16545595-16548294 : negative
Gene Family Information
- ID HOM05D001222
- #Genes/#Species 510/97
- Phylogenetic origin
- ID ORTHO05D001195
- #Genes/#Species 460/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT4G34660.1
- uniprot Q8VWF1
Descriptions
- Description SH3 domain-containing protein
- Computational description SH3 domain-containing protein; CONTAINS InterPro DOMAIN/s: Src homology-3 domain (InterPro:IPR001452); BEST Arabidopsis thaliana protein match is: SH3 domain-containing protein (TAIR:AT4G18060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0072583 | IPI | Gene Ontology | clathrin-dependent endocytosis | 1 |
| GO:1903527 | IMP | Gene Ontology | positive regulation of membrane tubulation | 2 |
| GO:0009920 | IDA | Gene Ontology | cell plate formation involved in plant-type cell wall biogenesis | 2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IPI | Gene Ontology | protein binding | 2 |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0043325 | IDA | Gene Ontology | phosphatidylinositol-3,4-bisphosphate binding | 2 |
| GO:0043130 | IDA | Gene Ontology | ubiquitin binding | 2 |
| GO:0032266 | IDA | Gene Ontology | phosphatidylinositol-3-phosphate binding | 2 |
| GO:0005547 | IDA | Gene Ontology | phosphatidylinositol-3,4,5-trisphosphate binding | 2 |
| GO:0005546 | IDA | Gene Ontology | phosphatidylinositol-4,5-bisphosphate binding | 2 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030136 | IEA | GOA Database | clathrin-coated vesicle | |
| GO:0030136 | IDA | Gene Ontology | clathrin-coated vesicle | 3 |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0031410 | IEA | GOA Database | cytoplasmic vesicle | |
| GO:0005768 | IEA | GOA Database | endosome | |
| GO:0005768 | IDA | Gene Ontology | endosome | 2 |
| GO:0000421 | IEA | GOA Database | autophagosome membrane | |
| GO:0005770 | IEA | GOA Database | late endosome | |
| GO:0005737 | IEA | GOA Database | cytoplasm | |
| GO:0005737 | ISM | Gene Ontology | cytoplasm | |
| GO:0005886 | IEA | GOA Database | plasma membrane | |
| GO:0005886 | IDA | Gene Ontology | plasma membrane | 2 |
| GO:0005829 | IDA | Gene Ontology | cytosol | 1 |
| GO:0005634 | IDA | Gene Ontology | nucleus | 1 |
| GO:0009504 | IDA | Gene Ontology | cell plate | 2 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 22.4.1.1.4 | Vesicle trafficking.endocytic trafficking.ESCRT-mediated sorting.ESCRT-I complex.auxiliary VPS23-interacting component SH3P2 |