Gene: AT4G32940
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G32940
- Transcript Identifier AT4G32940.1
- Gene Type Coding gene
- Location Chr4 : 15900557-15903161 : negative
Gene Family Information
- ID HOM05D000927
- #Genes/#Species 650/99
- Phylogenetic origin
- ID ORTHO05D000850
- #Genes/#Species 584/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT4G32940.1
- symbol GAMMA-VPE
- Alias GAMMAVPE
- uniprot Q39119
Descriptions
- Description gamma vacuolar processing enzyme
- Computational description gamma vacuolar processing enzyme (GAMMA-VPE); CONTAINS InterPro DOMAIN/s: Peptidase C13, legumain (InterPro:IPR001096); BEST Arabidopsis thaliana protein match is: alpha-vacuolar processing enzyme (TAIR:AT2G25940.1); Has 789 Blast hits to 787 proteins in 239 species: Archae - 4; Bacteria - 12; Metazoa - 277; Fungi - 115; Plants - 257; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0051603 | IEA | GOA Database | proteolysis involved in cellular protein catabolic process | |
| GO:0051603 | IBA | Gene Ontology | proteolysis involved in cellular protein catabolic process | 1 |
| GO:0051603 | IEA | InterPro | proteolysis involved in cellular protein catabolic process | |
| GO:0006508 | IEA | GOA Database | proteolysis | |
| GO:0006508 | IEA | InterPro | proteolysis | |
| GO:0006624 | IDA ISS, IBA | Gene Ontology | vacuolar protein processing | 1 2 3 |
| GO:0010150 | IEP | Gene Ontology | leaf senescence | 3 |
| GO:0009753 | IEP | Gene Ontology | response to jasmonic acid | 3 |
| GO:0009751 | IEP | Gene Ontology | response to salicylic acid | 3 |
| GO:0009723 | IEP | Gene Ontology | response to ethylene | 3 |
| GO:0009611 | IEP | Gene Ontology | response to wounding | 3 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004197 | IEA | GOA Database | cysteine-type endopeptidase activity | |
| GO:0004197 | IDA IBA | Gene Ontology | cysteine-type endopeptidase activity | 1 4 |
| GO:0004197 | IEA | InterPro | cysteine-type endopeptidase activity | |
| GO:0008233 | IEA | GOA Database | peptidase activity | |
| GO:0008233 | IEA | InterPro | peptidase activity | |
| GO:0008234 | IEA | GOA Database | cysteine-type peptidase activity | |
| GO:0016787 | IEA | GOA Database | hydrolase activity | |
| GO:0004175 | IDA | Gene Ontology | endopeptidase activity | 3 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000323 | IEA | GOA Database | lytic vacuole | |
| GO:0000323 | IDA | Gene Ontology | lytic vacuole | 3 |
| GO:0005773 | IEA | GOA Database | vacuole | |
| GO:0005773 | ISS | Gene Ontology | vacuole | 2 |
| GO:0000326 | ISS | Gene Ontology | protein storage vacuole | |
| GO:0005576 | ISM | Gene Ontology | extracellular region |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |