Gene: AT4G31010

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G31010
  • Transcript Identifier AT4G31010.1
  • Gene Type Coding gene
  • Location Chr4 : 15106708-15108446 : positive

Gene Family Information

  • ID HOM05D001273
  • #Genes/#Species 492/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G31010.1
  • Alias mCSF1,mitochondrial CAF-like splicing factor 1
  • uniprot Q8VYD9

Descriptions

  • Description RNA-binding CRS1 / YhbY (CRM) domain-containing protein
  • Computational description RNA-binding CRS1 / YhbY (CRM) domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: RNA-binding CRS1 / YhbY (CRM) domain-containing protein (TAIR:AT5G54890.1); Has 267 Blast hits to 236 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 267; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000373
IMP
IEA
Gene OntologyGroup II intron splicing1
GO:0000373
IEA
InterProGroup II intron splicing
GO:0009793
IMP
Gene Ontologyembryo development ending in seed dormancy1
GO:0032981
IMP
Gene Ontologymitochondrial respiratory chain complex I assembly1
GO:0033617
IMP
Gene Ontologymitochondrial cytochrome c oxidase assembly1
GO:0006397
IEA
GOA DatabasemRNA processing
GO:0008380
IEA
GOA DatabaseRNA splicing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
IEA
GOA Databasemitochondrion
GO:0005739
IDA, IMP
ISM
Gene Ontologymitochondrion1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035920 YhbY-like superfamily
IPR001890 RNA-binding, CRM domain
IPR044599 CRS2-associated factor, plant
Mapman id Description
16.11.4.2.1.8 RNA processing.organelle machinery.pre-mRNA splicing.mitochondrial RNA splicing.group-II intron splicing.splicing factor (mCSF)