Gene: AT4G29470
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G29470
- Transcript Identifier AT4G29470.2
- Gene Type Coding gene
- Location Chr4 : 14484591-14485714 : negative
Gene Family Information
- ID HOM05D002299
- #Genes/#Species 294/94
- Phylogenetic origin
- ID ORTHO05D002358
- #Genes/#Species 295/95
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT4G29470.2
- symbol PLA2-DELTA
- full_name phospholipase A2 delta
- uniprot Q8GV50
Descriptions
- Description Phospholipase A2 family protein
- Computational description Phospholipase A2 family protein; FUNCTIONS IN: phospholipase A2 activity; INVOLVED IN: phospholipid metabolic process, lipid catabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Phospholipase A2, active site (InterPro:IPR013090), Phospholipase A2 (InterPro:IPR016090); BEST Arabidopsis thaliana protein match is: Phospholipase A2 family protein (TAIR:AT4G29460.1); Has 245 Blast hits to 245 proteins in 48 species: Archae - 0; Bacteria - 14; Metazoa - 119; Fungi - 0; Plants - 108; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0050482 | IEA | Gene Ontology | arachidonic acid secretion | |
| GO:0050482 | IEA | InterPro | arachidonic acid secretion | |
| GO:0006644 | IEA | GOA Database | phospholipid metabolic process | |
| GO:0006644 | IBA | Gene Ontology | phospholipid metabolic process | 1 |
| GO:0006644 | IEA | InterPro | phospholipid metabolic process | |
| GO:0016042 | IEA | GOA Database | lipid catabolic process | |
| GO:0016042 | IEA | InterPro | lipid catabolic process | |
| GO:0006629 | IEA | GOA Database | lipid metabolic process | |
| GO:0009860 | IDA IBA | Gene Ontology | pollen tube growth | 1 2 |
| GO:0009555 | IMP IBA | Gene Ontology | pollen development | 1 2 |
| GO:0009846 | IDA IBA | Gene Ontology | pollen germination | 1 2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005509 | IEA | GOA Database | calcium ion binding | |
| GO:0005509 | IBA | Gene Ontology | calcium ion binding | 1 |
| GO:0005509 | IEA | InterPro | calcium ion binding | |
| GO:0004623 | IEA | Gene Ontology | phospholipase A2 activity | |
| GO:0004623 | IEA | InterPro | phospholipase A2 activity | |
| GO:0016787 | IEA | GOA Database | hydrolase activity | |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0102567 | IEA | GOA Database | phospholipase A2 activity (consuming 1,2-dipalmitoylphosphatidylcholine) | |
| GO:0102568 | IEA | GOA Database | phospholipase A2 activity consuming 1,2-dioleoylphosphatidylethanolamine) | |
| GO:0047498 | IBA | Gene Ontology | calcium-dependent phospholipase A2 activity | 1 |
| GO:0005543 | IBA | Gene Ontology | phospholipid binding | 1 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005576 | IEA | GOA Database | extracellular region | |
| GO:0005576 | ISM | Gene Ontology | extracellular region | |
| GO:0005783 | IEA | GOA Database | endoplasmic reticulum | |
| GO:0005783 | IDA | Gene Ontology | endoplasmic reticulum | 2 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 5.7.2.2.1 | Lipid metabolism.lipid degradation.phospholipase activities.phospholipase A2 activities.phospholipase A2 (sPLA2) |