Gene: AT4G28410

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G28410
  • Transcript Identifier AT4G28410.1
  • Gene Type Coding gene
  • Location Chr4 : 14052391-14054846 : positive

Gene Family Information

  • ID HOM05D000658
  • #Genes/#Species 864/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G28410.1
  • Alias RSA1,Root System Architecture 1
  • uniprot F4JL94

Descriptions

  • Description Tyrosine transaminase family protein
  • Computational description Tyrosine transaminase family protein; FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate synthase activity, pyridoxal phosphate binding, transferase activity, transferring nitrogenous groups, transaminase activity, catalytic activity; INVOLVED IN: cellular amino acid and derivative metabolic process, biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Tyrosine transaminase (InterPro:IPR021178), Tyrosine/nicotianamine aminotransferase (InterPro:IPR005958), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Tyrosine transaminase family protein (TAIR:AT2G20610.1); Has 36818 Blast hits to 36812 proteins in 2952 species: Archae - 883; Bacteria - 26284; Metazoa - 751; Fungi - 692; Plants - 1240; Viruses - 0; Other Eukaryotes - 6968 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006520
IEA
Gene Ontologycellular amino acid metabolic process
GO:0006520
IEA
InterProcellular amino acid metabolic process
GO:0009058
IEA
Gene Ontologybiosynthetic process
GO:0009058
IEA
InterProbiosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008483
IEA
Gene Ontologytransaminase activity
GO:0008483
IEA
InterProtransaminase activity
GO:0030170
IEA
Gene Ontologypyridoxal phosphate binding
GO:0030170
IEA
InterPropyridoxal phosphate binding
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015424 Pyridoxal phosphate-dependent transferase
IPR005958 Tyrosine/nicotianamine aminotransferase
IPR015422 Pyridoxal phosphate-dependent transferase, small domain
IPR004839 Aminotransferase, class I/classII
IPR015421 Pyridoxal phosphate-dependent transferase, major domain
Mapman id Description
4.2.8.4.1 Amino acid metabolism.degradation.aromatic amino acid.tyrosine.tyrosine aminotransferase (TAT)