Gene: AT4G28250

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G28250
  • Transcript Identifier AT4G28250.1
  • Gene Type Coding gene
  • Location Chr4 : 14000446-14001945 : negative

Gene Family Information

  • ID HOM05D000383
  • #Genes/#Species 1279/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G28250.1
  • symbol EXPB3
  • Alias ATEXPB3,expansin B3,ATHEXP BETA 1.6
  • uniprot Q9M0I2

Descriptions

  • Description expansin B3
  • Computational description expansin B3 (EXPB3); INVOLVED IN: response to cyclopentenone, syncytium formation, plant-type cell wall organization, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin B1 (TAIR:AT2G20750.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019953
IEA
Gene Ontologysexual reproduction
GO:0019953
IEA
InterProsexual reproduction
GO:0009826
NAS
Gene Ontologyunidimensional cell growth1
GO:0009828
NAS
Gene Ontologyplant-type cell wall loosening1
GO:0006949
IEP
IBA
Gene Ontologysyncytium formation2 3
GO:0071555
IEA
GOA Databasecell wall organization

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
ISM
IEA
Gene Ontologyextracellular region
GO:0005576
IEA
InterProextracellular region
GO:0009506
IDA
GOA Databaseplasmodesma
GO:0009506
HDA
IBA
Gene Ontologyplasmodesma3 4
GO:0016020
IEA
GOA Databasemembrane
GO:0005618
IEA
GOA Databasecell wall

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036908 RlpA-like domain superfamily
IPR007112 Expansin/pollen allergen, DPBB domain
IPR036749 Expansin, cellulose-binding-like domain superfamily
IPR007117 Expansin, cellulose-binding-like domain
IPR009009 RlpA-like protein, double-psi beta-barrel domain
IPR005795 Major pollen allergen Lol pI
IPR007118 Expansin/Lol pI
Mapman id Description
21.4.2.3 Cell wall organisation.cell wall proteins.expansin activities.beta-class expansin