Gene: AT4G28220

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G28220
  • Transcript Identifier AT4G28220.1
  • Gene Type Coding gene
  • Location Chr4 : 13993078-13995651 : positive

Gene Family Information

  • ID HOM05D000873
  • #Genes/#Species 682/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G28220.1
  • symbol NDB1
  • uniprot Q1JPL4

Descriptions

  • Description NAD(P)H dehydrogenase B1
  • Computational description NAD(P)H dehydrogenase B1 (NDB1); FUNCTIONS IN: NADH dehydrogenase activity, disulfide oxidoreductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: extrinsic to mitochondrial inner membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyridine nucleotide-disulphide oxidoreductase, class-II (InterPro:IPR000103), FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region (InterPro:IPR001327), EF-HAND 2 (InterPro:IPR018249); BEST Arabidopsis thaliana protein match is: NAD(P)H dehydrogenase B3 (TAIR:AT4G21490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070995
IMP
Gene OntologyNADPH oxidation1
GO:0006116
IEA
Gene OntologyNADH oxidation
GO:0006116
IEA
InterProNADH oxidation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0016491
ISS
Gene Ontologyoxidoreductase activity
GO:0016491
IEA
InterProoxidoreductase activity
GO:0003954
IEA
GOA DatabaseNADH dehydrogenase activity
GO:0003954
ISS
Gene OntologyNADH dehydrogenase activity
GO:0003954
IEA
InterProNADH dehydrogenase activity
GO:0050136
IEA
GOA DatabaseNADH dehydrogenase (quinone) activity
GO:0003959
IMP
Gene OntologyNADPH dehydrogenase activity1
GO:0005509
IEA
Gene Ontologycalcium ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0005739
IEA
GOA Databasemitochondrion
GO:0005739
IDA, HDA
ISM
Gene Ontologymitochondrion2 3
GO:0005777
IEA
GOA Databaseperoxisome
GO:0005777
IDA
Gene Ontologyperoxisome4
GO:0005743
IEA
GOA Databasemitochondrial inner membrane
GO:0031314
IDA
Gene Ontologyextrinsic component of mitochondrial inner membrane5
GO:0005758
ISS
Gene Ontologymitochondrial intermembrane space

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR045024 Alternative NADH dehydrogenase
IPR036188 FAD/NAD(P)-binding domain superfamily
IPR023753 FAD/NAD(P)-binding domain
IPR011992 EF-hand domain pair
Mapman id Description
2.4.2.1.2 Cellular respiration.oxidative phosphorylation.alternative NAD(P)H dehydrogenase activities.type-II NAD(P)H dehydrogenase activities.NAD(P)H dehydrogenase (NDB)