Gene: AT4G27790

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G27790
  • Transcript Identifier AT4G27790.1
  • Gene Type Coding gene
  • Location Chr4 : 13850066-13851488 : positive

Gene Family Information

  • ID HOM05D002707
  • #Genes/#Species 254/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G27790.1
  • uniprot Q9STP7

Descriptions

  • Description Calcium-binding EF hand family protein
  • Computational description Calcium-binding EF hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF hand family protein (TAIR:AT5G08580.1); Has 4096 Blast hits to 3931 proteins in 669 species: Archae - 0; Bacteria - 5; Metazoa - 1396; Fungi - 738; Plants - 1509; Viruses - 0; Other Eukaryotes - 448 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008150
ND
Gene Ontologybiological_process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005509
IBA
IEA
Gene Ontologycalcium ion binding1
GO:0005509
IEA
InterProcalcium ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005783
IBA
Gene Ontologyendoplasmic reticulum1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011992 EF-hand domain pair
IPR002048 EF-hand domain
Mapman id Description
35.1 not assigned.annotated