Gene: AT4G26470
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G26470
- Transcript Identifier AT4G26470.2
- Gene Type Coding gene
- Location Chr4 : 13371377-13372197 : positive
Gene Family Information
- ID HOM05D002843
- #Genes/#Species 244/96
- Phylogenetic origin
- ID ORTHO05D003086
- #Genes/#Species 245/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT4G26470.2
- uniprot Q52K82
Descriptions
- Description Calcium-binding EF-hand family protein
- Computational description Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cytoplasm; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT3G24110.1); Has 9300 Blast hits to 7546 proteins in 1004 species: Archae - 0; Bacteria - 25; Metazoa - 3748; Fungi - 1101; Plants - 3090; Viruses - 0; Other Eukaryotes - 1336 (source: NCBI BLink).
- Computational description Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; LOCATED IN: cytoplasm; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT3G24110.1); Has 6386 Blast hits to 5124 proteins in 870 species: Archae - 0; Bacteria - 22; Metazoa - 2243; Fungi - 905; Plants - 2494; Viruses - 0; Other Eukaryotes - 722 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005509 | IBA IEA | Gene Ontology | calcium ion binding | 1 |
| GO:0005509 | IEA | InterPro | calcium ion binding | |
| GO:0046872 | IEA | GOA Database | metal ion binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005886 | ISM | Gene Ontology | plasma membrane | |
| GO:0005737 | IDA | Gene Ontology | cytoplasm | 2 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 27.7.2 | Multi-process regulation.calcium-dependent signalling.calcium sensor (CML) |