Gene: AT4G25600
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G25600
- Transcript Identifier AT4G25600.1
- Gene Type Coding gene
- Location Chr4 : 13060712-13062359 : positive
Gene Family Information
- ID HOM05D000373
- #Genes/#Species 1301/100
- Phylogenetic origin
- ID ORTHO05D001146
- #Genes/#Species 475/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT4G25600.1
- uniprot Q8GXT7
Descriptions
- Description Oxoglutarate/iron-dependent oxygenase
- Computational description Oxoglutarate/iron-dependent oxygenase; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, iron ion binding, L-ascorbic acid binding; INVOLVED IN: oxidation reduction; CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase, alpha subunit (InterPro:IPR006620), Metridin-like ShK toxin (InterPro:IPR003582); BEST Arabidopsis thaliana protein match is: Oxoglutarate/iron-dependent oxygenase (TAIR:AT3G28480.1); Has 1193 Blast hits to 1161 proteins in 233 species: Archae - 0; Bacteria - 285; Metazoa - 424; Fungi - 0; Plants - 372; Viruses - 8; Other Eukaryotes - 104 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0018401 | IBA | Gene Ontology | peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0051213 | IEA | GOA Database | dioxygenase activity | |
| GO:0031418 | IEA | Gene Ontology | L-ascorbic acid binding | |
| GO:0031418 | IEA | InterPro | L-ascorbic acid binding | |
| GO:0016705 | IEA | GOA Database | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | |
| GO:0016705 | IEA | InterPro | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | |
| GO:0005506 | IEA | Gene Ontology | iron ion binding | |
| GO:0005506 | IEA | InterPro | iron ion binding | |
| GO:0016491 | IEA | GOA Database | oxidoreductase activity | |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0004656 | IBA IEA | Gene Ontology | procollagen-proline 4-dioxygenase activity | 1 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005783 | IEA | GOA Database | endoplasmic reticulum | |
| GO:0005783 | IBA | Gene Ontology | endoplasmic reticulum | 1 |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0005789 | IEA | GOA Database | endoplasmic reticulum membrane | |
| GO:0009507 | ISM | Gene Ontology | chloroplast | |
| GO:0005576 | ISM | Gene Ontology | extracellular region |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 18.9.1 | Protein modification.hydroxylation.prolyl hydroxylase |