Gene: AT4G25515
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G25515
- Transcript Identifier AT4G25515.1
- Gene Type Coding gene
- Location Chr4 : 13028219-13031463 : positive
Gene Family Information
- ID HOM05D001175
- #Genes/#Species 529/97
- Phylogenetic origin
- ID ORTHO05D003020
- #Genes/#Species 248/89
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT4G25515.1
- symbol SLK3
- uniprot F4JT98
Descriptions
- Description SEUSS-like 3
- Computational description SEUSS-like 3 (SLK3); BEST Arabidopsis thaliana protein match is: SEUSS-like 1 (TAIR:AT4G25520.1); Has 4377 Blast hits to 3114 proteins in 231 species: Archae - 0; Bacteria - 84; Metazoa - 736; Fungi - 339; Plants - 190; Viruses - 30; Other Eukaryotes - 2998 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045944 | IBA | Gene Ontology | positive regulation of transcription by RNA polymerase II | 1 |
| GO:0000122 | IBA | Gene Ontology | negative regulation of transcription by RNA polymerase II | 1 |
| GO:0009908 | IEA | GOA Database | flower development | |
| GO:0030154 | IEA | GOA Database | cell differentiation |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | ISM, IBA | Gene Ontology | nucleus | 1 |
| GO:0005667 | IBA | Gene Ontology | transcription regulator complex | 1 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR029005 | LIM-domain binding protein/SEUSS |
| Mapman id | Description |
|---|---|
| 15.5.51.6.2 | RNA biosynthesis.transcriptional regulation.transcriptional repression.LEUNIG-SEUSS repressor complex.adapter component SEU/SLK |