Gene: AT4G25240

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G25240
  • Transcript Identifier AT4G25240.1
  • Gene Type Coding gene
  • Location Chr4 : 12930539-12933563 : positive

Gene Family Information

  • ID HOM05D000201
  • #Genes/#Species 1953/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G25240.1
  • symbol SKS1
  • uniprot Q8VXX5

Descriptions

  • Description SKU5 similar 1
  • Computational description SKU5 similar 1 (SKS1); FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 2 (TAIR:AT5G51480.1); Has 5221 Blast hits to 5195 proteins in 927 species: Archae - 4; Bacteria - 1535; Metazoa - 283; Fungi - 1954; Plants - 1280; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink).
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0016491
IBA
Gene Ontologyoxidoreductase activity1
GO:0016491
IEA
InterProoxidoreductase activity
GO:0005507
IEA
Gene Ontologycopper ion binding
GO:0005507
IEA
InterProcopper ion binding
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
IDA
IEA
GOA Databaseplasma membrane
GO:0005886
HDA
Gene Ontologyplasma membrane2
GO:0031225
IEA
GOA Databaseanchored component of membrane
GO:0031225
TAS
Gene Ontologyanchored component of membrane3
GO:0016020
IEA
GOA Databasemembrane
GO:0009506
IDA
GOA Databaseplasmodesma
GO:0009506
HDA
Gene Ontologyplasmodesma4
GO:0046658
IDA
IBA
Gene Ontologyanchored component of plasma membrane1 5
GO:0005829
HDA
Gene Ontologycytosol6
GO:0005576
ISM
Gene Ontologyextracellular region

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR034271 Ascorbate oxidase homologue, second cupredoxin domain
IPR008972 Cupredoxin
IPR011707 Multicopper oxidase, N-termianl
IPR045087 Multicopper oxidase
IPR011706 Multicopper oxidase, C-terminal
IPR034275 Ascorbate oxidase homologue, third cupredoxin domain
IPR001117 Multicopper oxidase, type 1
IPR034273 Ascorbate oxidase homologue, first cupredoxin domain
Mapman id Description
50.1.10 Enzyme classification.EC_1 oxidoreductases.EC_1.10 oxidoreductase acting on diphenol or related substance as donor