Gene: AT4G25180
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G25180
- Transcript Identifier AT4G25180.1
- Gene Type Coding gene
- Location Chr4 : 12911746-12913907 : negative
Gene Family Information
- ID HOM05D001514
- #Genes/#Species 419/100
- Phylogenetic origin
- ID ORTHO05D002956
- #Genes/#Species 252/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT4G25180.1
- uniprot Q6ICW8
Descriptions
- Description RNA polymerase III RPC4
- Computational description RNA polymerase III RPC4; FUNCTIONS IN: DNA-directed RNA polymerase activity, DNA binding; INVOLVED IN: transcription from RNA polymerase III promoter; LOCATED IN: DNA-directed RNA polymerase III complex; CONTAINS InterPro DOMAIN/s: RNA polymerase III Rpc4 (InterPro:IPR007811); BEST Arabidopsis thaliana protein match is: RNA polymerase III RPC4 (TAIR:AT5G09380.1); Has 141 Blast hits to 141 proteins in 63 species: Archae - 0; Bacteria - 2; Metazoa - 43; Fungi - 19; Plants - 57; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006383 | IEA | Gene Ontology | transcription by RNA polymerase III | |
| GO:0006383 | IEA | InterPro | transcription by RNA polymerase III |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | Gene Ontology | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003899 | IEA | GOA Database | DNA-directed 5'-3' RNA polymerase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | ISM | Gene Ontology | nucleus | |
| GO:0005666 | IEA | GOA Database | RNA polymerase III complex | |
| GO:0005666 | IBA | Gene Ontology | RNA polymerase III complex | 1 |
| GO:0005666 | IEA | InterPro | RNA polymerase III complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR007811 | DNA-directed RNA polymerase III subunit RPC4 |
| Mapman id | Description |
|---|---|
| 15.4.6.2 | RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIf transcription factor heterodimer.large subunit |