Gene: AT4G25090

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G25090
  • Transcript Identifier AT4G25090.1
  • Gene Type Coding gene
  • Location Chr4 : 12878930-12883599 : negative

Gene Family Information

  • ID HOM05D000501
  • #Genes/#Species 1065/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G25090.1
  • uniprot Q9SW17

Descriptions

  • Description Riboflavin synthase-like superfamily protein
  • Computational description Riboflavin synthase-like superfamily protein; FUNCTIONS IN: in 7 functions; INVOLVED IN: oxidation reduction; LOCATED IN: cytosolic ribosome, vacuole; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Cytochrome b245, heavy chain (InterPro:IPR000778), EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-hand-like domain (InterPro:IPR011992), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130), Ferric reductase, NAD binding (InterPro:IPR013121), NADPH oxidase Respiratory burst (InterPro:IPR013623), EF-HAND 2 (InterPro:IPR018249), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938); BEST Arabidopsis thaliana protein match is: NADPH/respiratory burst oxidase protein D (TAIR:AT5G51060.1); Has 2591 Blast hits to 2460 proteins in 416 species: Archae - 12; Bacteria - 368; Metazoa - 707; Fungi - 773; Plants - 526; Viruses - 0; Other Eukaryotes - 205 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0098869
IEA
GOA Databasecellular oxidant detoxification

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0050664
IEA
Gene Ontologyoxidoreductase activity, acting on NAD(P)H, oxygen as acceptor
GO:0050664
IEA
InterProoxidoreductase activity, acting on NAD(P)H, oxygen as acceptor
GO:0004601
IEA
GOA Databaseperoxidase activity
GO:0004601
IEA
InterProperoxidase activity
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0016491
IEA
InterProoxidoreductase activity
GO:0005509
IEA
Gene Ontologycalcium ion binding
GO:0005509
IEA
InterProcalcium ion binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016174
IBA
Gene OntologyNAD(P)H oxidase H2O2-forming activity1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0022626
IDA
GOA Databasecytosolic ribosome
GO:0022626
HDA
Gene Ontologycytosolic ribosome2
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IEA
InterPromembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0005773
IDA
GOA Databasevacuole
GO:0005886
ISM, IBA
Gene Ontologyplasma membrane1
GO:0000325
HDA
Gene Ontologyplant-type vacuole3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002048 EF-hand domain
IPR011992 EF-hand domain pair
IPR000778 Cytochrome b245, heavy chain
IPR017938 Riboflavin synthase-like beta-barrel
IPR013130 Ferric reductase transmembrane component-like domain
IPR013121 Ferric reductase, NAD binding domain
IPR013112 FAD-binding 8
IPR013623 NADPH oxidase Respiratory burst
IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain
Mapman id Description
10.1.1 Redox homeostasis.controlled reactive oxygen generation.NADPH-oxidase (Rboh)