Gene: AT4G22880

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G22880
  • Transcript Identifier AT4G22880.2
  • Gene Type Coding gene
  • Location Chr4 : 12004905-12006059 : negative

Gene Family Information

  • ID HOM05D000018
  • #Genes/#Species 7046/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G22880.2
  • symbol LDOX
  • Alias ANS,ANTHOCYANIDIN SYNTHASE,TDS4,TANNIN DEFICIENT SEED 4,TT18
  • uniprot Q96323

Descriptions

  • Description leucoanthocyanidin dioxygenase
  • Computational description leucoanthocyanidin dioxygenase (LDOX); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: flavonol synthase 1 (TAIR:AT5G08640.2); Has 8356 Blast hits to 8311 proteins in 977 species: Archae - 0; Bacteria - 1058; Metazoa - 85; Fungi - 889; Plants - 4934; Viruses - 0; Other Eukaryotes - 1390 (source: NCBI BLink).
  • Computational description leucoanthocyanidin dioxygenase (LDOX); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: flavonol synthase 1 (TAIR:AT5G08640.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009718
TAS, IEA
Gene Ontologyanthocyanin-containing compound biosynthetic process1
GO:0007033
IMP
Gene Ontologyvacuole organization2
GO:0010023
IMP
Gene Ontologyproanthocyanidin biosynthetic process2
GO:0009611
IEP
Gene Ontologyresponse to wounding3
GO:0009753
IEP
Gene Ontologyresponse to jasmonic acid3
GO:0009813
IEA
GOA Databaseflavonoid biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0050589
IEA
GOA Databaseleucocyanidin oxygenase activity
GO:0050589
ISS
Gene Ontologyleucocyanidin oxygenase activity4
GO:0051213
IEA
GOA Databasedioxygenase activity
GO:0051213
IBA
Gene Ontologydioxygenase activity5
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0031418
IEA
GOA DatabaseL-ascorbic acid binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027443 Isopenicillin N synthase-like superfamily
IPR044861 Isopenicillin N synthase-like, Fe(2+) 2OG dioxygenase domain
IPR026992 Non-haem dioxygenase N-terminal domain
Mapman id Description
9.2.2.10.2 Secondary metabolism.phenolics.flavonoid biosynthesis.anthocyanidins.anthocyanidin synthase