Gene: AT4G22680
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G22680
- Transcript Identifier AT4G22680.1
- Gene Type Coding gene
- Location Chr4 : 11922789-11924080 : negative
Gene Family Information
- ID HOM05D000008
- #Genes/#Species 9932/97
- Phylogenetic origin
- ID ORTHO05D000005
- #Genes/#Species 8869/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT4G22680.1
- symbol MYB85
- Alias AtMYB85,myb domain protein 85
- uniprot Q94GA6
Descriptions
- Description myb domain protein 85
- Computational description myb domain protein 85 (MYB85); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 42 (TAIR:AT4G12350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0045893 | IDA | Gene Ontology | positive regulation of transcription, DNA-templated | 1 |
GO:2000652 | IMP, IGI | Gene Ontology | regulation of secondary cell wall biogenesis | 1 2 |
GO:0009094 | IGI | Gene Ontology | L-phenylalanine biosynthetic process | 2 |
GO:1901141 | IGI | Gene Ontology | regulation of lignin biosynthetic process | 2 |
GO:2000762 | IGI | Gene Ontology | regulation of phenylpropanoid metabolic process | 2 |
GO:0030154 | IBA | Gene Ontology | cell differentiation | 3 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003700 | IDA ISS | Gene Ontology | DNA-binding transcription factor activity | 2 4 |
GO:0000976 | IPI IBA | Gene Ontology | transcription cis-regulatory region binding | 3 5 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | IEA | GOA Database | nucleus | |
GO:0005634 | IDA ISM, IBA | Gene Ontology | nucleus | 1 3 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
15.5.2.1 | RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB) |