Gene: AT4G22680

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G22680
  • Transcript Identifier AT4G22680.1
  • Gene Type Coding gene
  • Location Chr4 : 11922789-11924080 : negative

Gene Family Information

  • ID HOM05D000008
  • #Genes/#Species 9932/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G22680.1
  • symbol MYB85
  • Alias AtMYB85,myb domain protein 85
  • uniprot Q94GA6

Descriptions

  • Description myb domain protein 85
  • Computational description myb domain protein 85 (MYB85); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 42 (TAIR:AT4G12350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045893
IDA
Gene Ontologypositive regulation of transcription, DNA-templated1
GO:2000652
IMP, IGI
Gene Ontologyregulation of secondary cell wall biogenesis1 2
GO:0009094
IGI
Gene OntologyL-phenylalanine biosynthetic process2
GO:1901141
IGI
Gene Ontologyregulation of lignin biosynthetic process2
GO:2000762
IGI
Gene Ontologyregulation of phenylpropanoid metabolic process2
GO:0030154
IBA
Gene Ontologycell differentiation3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IDA
ISS
Gene OntologyDNA-binding transcription factor activity2 4
GO:0000976
IPI
IBA
Gene Ontologytranscription cis-regulatory region binding3 5

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM, IBA
Gene Ontologynucleus1 3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009057 Homeobox-like domain superfamily
IPR001005 SANT/Myb domain
IPR017930 Myb domain
Mapman id Description
15.5.2.1 RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)