Gene: AT4G21010

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G21010
  • Transcript Identifier AT4G21010.1
  • Gene Type Coding gene
  • Location Chr4 : 11226317-11227363 : negative

Gene Family Information

  • ID HOM05D003213
  • #Genes/#Species 213/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G21010.1
  • uniprot Q9SUB3

Descriptions

  • Description Transcription initiation factor TFIIE, beta subunit
  • Computational description Transcription initiation factor TFIIE, beta subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter; LOCATED IN: transcription factor TFIIE complex; CONTAINS InterPro DOMAIN/s: Transcription initiation factor TFIIE, beta subunit (InterPro:IPR016656), Transcription factor TFIIE beta subunit, DNA-binding domain (InterPro:IPR003166); BEST Arabidopsis thaliana protein match is: Transcription initiation factor TFIIE, beta subunit (TAIR:AT4G20330.1); Has 322 Blast hits to 322 proteins in 147 species: Archae - 0; Bacteria - 0; Metazoa - 120; Fungi - 109; Plants - 70; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006367
IEA
GOA Databasetranscription initiation from RNA polymerase II promoter
GO:0006367
IBA
Gene Ontologytranscription initiation from RNA polymerase II promoter1
GO:0006367
IEA
InterProtranscription initiation from RNA polymerase II promoter
GO:0006413
IEA
GOA Databasetranslational initiation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003743
IEA
GOA Databasetranslation initiation factor activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus
GO:0005673
IEA
GOA Databasetranscription factor TFIIE complex
GO:0005673
IBA
Gene Ontologytranscription factor TFIIE complex1
GO:0005673
IEA
InterProtranscription factor TFIIE complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016656 Transcription initiation factor TFIIE, beta subunit
IPR040501 TFA2, Winged helix domain 2
IPR003166 Transcription factor TFIIE beta subunit, DNA-binding domain
Mapman id Description
15.3.3.3.2 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TFIIe basal transcription factor heterodimer.subunit beta