Gene: AT4G19690

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G19690
  • Transcript Identifier AT4G19690.2
  • Gene Type Coding gene
  • Location Chr4 : 10707487-10708723 : positive

Gene Family Information

  • ID HOM05D000360
  • #Genes/#Species 1326/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G19690.2
  • symbol IRT1
  • Alias ATIRT1,ARABIDOPSIS IRON-REGULATED TRANSPORTER 1
  • uniprot Q38856

Descriptions

  • Description iron-regulated transporter 1
  • Computational description iron-regulated transporter 1 (IRT1); FUNCTIONS IN: manganese ion transmembrane transporter activity, zinc ion transmembrane transporter activity, cadmium ion transmembrane transporter activity, copper uptake transmembrane transporter activity, iron ion transmembrane transporter activity; INVOLVED IN: in 11 processes; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: iron regulated transporter 2 (TAIR:AT4G19680.2); Has 937 Blast hits to 936 proteins in 155 species: Archae - 0; Bacteria - 2; Metazoa - 53; Fungi - 387; Plants - 413; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink).
  • Computational description iron-regulated transporter 1 (IRT1); FUNCTIONS IN: manganese ion transmembrane transporter activity, zinc ion transmembrane transporter activity, cadmium ion transmembrane transporter activity, copper uptake transmembrane transporter activity, iron ion transmembrane transporter activity; INVOLVED IN: in 11 processes; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc/iron permease, fungal/plant (InterPro:IPR004698), Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: iron regulated transporter 2 (TAIR:AT4G19680.2); Has 2264 Blast hits to 2071 proteins in 344 species: Archae - 4; Bacteria - 222; Metazoa - 575; Fungi - 696; Plants - 525; Viruses - 0; Other Eukaryotes - 242 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006811
IEA
GOA Databaseion transport
GO:0055072
IEA
GOA Databaseiron ion homeostasis
GO:0071577
IEA
GOA Databasezinc ion transmembrane transport
GO:0071577
IBA
Gene Ontologyzinc ion transmembrane transport1
GO:0071577
IEA
InterProzinc ion transmembrane transport
GO:0055085
IEA
GOA Databasetransmembrane transport
GO:0055085
IEA
InterProtransmembrane transport
GO:0035434
IEA
GOA Databasecopper ion transmembrane transport
GO:0030001
IEA
GOA Databasemetal ion transport
GO:0030001
IMP
Gene Ontologymetal ion transport2
GO:0030001
IEA
InterPrometal ion transport
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin Solyc02g069200.3
GO:0009617
IEP
Gene Ontologyresponse to bacterium3
GO:0006826
TAS
Gene Ontologyiron ion transport4
GO:0006828
TAS
Gene Ontologymanganese ion transport4
GO:0006829
TAS
Gene Ontologyzinc ion transport4
GO:0015691
TAS
Gene Ontologycadmium ion transport4
GO:0006879
IMP
Gene Ontologycellular iron ion homeostasis5
GO:0015675
IMP
Gene Ontologynickel cation transport6
GO:0034755
IEA
GOA Databaseiron ion transmembrane transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046873
IEA
GOA Databasemetal ion transmembrane transporter activity
GO:0046873
IEA
InterPrometal ion transmembrane transporter activity
GO:0005385
IEA
GOA Databasezinc ion transmembrane transporter activity
GO:0005385
IBA
TAS
Gene Ontologyzinc ion transmembrane transporter activity1 4
GO:0005385
IEA
InterProzinc ion transmembrane transporter activity
GO:0005381
IGI
TAS
Gene Ontologyiron ion transmembrane transporter activity7 8
GO:0005384
TAS
Gene Ontologymanganese ion transmembrane transporter activity4
GO:0015086
TAS
Gene Ontologycadmium ion transmembrane transporter activity4
GO:0005375
IGI
Gene Ontologycopper ion transmembrane transporter activity8

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005794
IEA
GOA DatabaseGolgi apparatus
GO:0005773
IEA
GOA Databasevacuole
GO:0005769
IEA
GOA Databaseearly endosome
GO:0005886
IEA
GOA Databaseplasma membrane
GO:0005886
IDA
IBA
Gene Ontologyplasma membrane1 2
GO:0005768
IEA
GOA Databaseendosome
GO:0005768
IDA
Gene Ontologyendosome9
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016021
IEA
InterProintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IBA
Gene Ontologymembrane1
GO:0016020
IEA
InterPromembrane
GO:0009507
ISM
Gene Ontologychloroplast
GO:0005802
IDA
Gene Ontologytrans-Golgi network2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004698 Zinc/iron permease, fungal/plant
IPR003689 Zinc/iron permease
Mapman id Description
24.2.11.1 Solute transport.carrier-mediated transport.ZIP family.metal cation transporter (ZIP)
25.4.1.2 Nutrient uptake.metal homeostasis.reduction-based strategy uptake.iron/zinc/manganese/cobalt cation uptake transporter (IRT)