Gene: AT4G19630

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G19630
  • Transcript Identifier AT4G19630.1
  • Gene Type Coding gene
  • Location Chr4 : 10684126-10684614 : negative

Gene Family Information

  • ID HOM05D000123
  • #Genes/#Species 2785/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G19630.1
  • uniprot Q8L7H2

Descriptions

  • Description winged-helix DNA-binding transcription factor family protein
  • Computational description winged-helix DNA-binding transcription factor family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: E2F/DP family winged-helix DNA-binding domain (TAIR:AT4G18870.1); Has 1128 Blast hits to 1120 proteins in 157 species: Archae - 0; Bacteria - 0; Metazoa - 238; Fungi - 121; Plants - 711; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
ISS
Gene Ontologyregulation of transcription, DNA-templated1
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0006357
IBA
Gene Ontologyregulation of transcription by RNA polymerase II2
GO:0034605
IBA
Gene Ontologycellular response to heat2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IEA
GOA DatabaseDNA-binding transcription factor activity
GO:0003700
ISS, IBA
Gene OntologyDNA-binding transcription factor activity1 2
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0000978
IBA
Gene OntologyRNA polymerase II cis-regulatory region sequence-specific DNA binding2
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0043565
IEA
GOA Databasesequence-specific DNA binding
GO:0043565
IEA
InterProsequence-specific DNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036390 Winged helix DNA-binding domain superfamily
IPR000232 Heat shock factor (HSF)-type, DNA-binding
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR027725 Heat shock transcription factor family
Mapman id Description
15.5.13 RNA biosynthesis.transcriptional regulation.transcription factor (HSF)